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Data manipulation and generation

Functions for manipulating or generating data.

lobanov_2()
Apply Lobanov 2.0 normalisation
pc_flip()
Flip PC loadings
correlation_test()
Permutation test of pairwise correlations
mds_test() experimental
Test optimal number of MDS dimensions.
pca_test()
PCA with confidence intervals and null distributions
permutation_test() superseded
Run permutation test on PCA analysis.
summary(<correlation_test>)
Summary function for correlation test object. Set alpha to change significance level.

Plotting functions

Functions for plotting.

plot_correlation_counts()
Plot of correlation counts from correlation_test object
plot_correlation_magnitudes()
Plot distribution of correlations from correlation_test object
plot_loadings()
Plot PC index loadings from pca_test object.
plot_mds_test() experimental
Plot mds_test() results
plot_pc_input()
Plot Scores from Significant PCs Against PCA Input
plot_pc_vs()
Plot PC loadings in vowel space
plot_vowel_space()
Plot vowel space for speaker or speakers.
plot_permutation_test() superseded
Create plot from permutation_test().
plot_variance_explained()
Create plot of variances explained from pca_test object
pca_contrib_plot()
PCA contribution plots

Datasets

Included datasets.

onze_vowels
Monophthong data for random sample of speakers from the ONZE corpus
onze_vowels_full
Monophthong data for speakers from the ONZE corpus
onze_intercepts
Speaker random intercepts from GAMMs for 100 ONZE speakers
onze_intercepts_full
Speaker random intercepts for 418 ONZE speakers
qb_vowels
Formants from QuakeBox 1
qb_intervals
Formant and amplitude for intervals of QuakeBox monologues
sim_matrix
Similarity matrix from online perception test.